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Positivity Thresholding
===================================================

This is the web-supplement to the manuscript entitled *Optimizing the F-measure to set positivity thresholds*.  We include the FCS data used to generate the results in the manuscript, code to implement the methods described therein and a step-by-step example of how to obtain a positivity threshold using the provided data and code.

**Contents**

.. toctree::
   :maxdepth: 0

   AnExample
   data
   implementation
   eqapol
   clustering-methods